BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C09SP1|AL427602
(1000 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1803 0.0
3x_Contig66 266 8e-71
>3x_Contig1530
Length = 6216
Score = 1803 bits (903), Expect = 0.0
Identities = 971/995 (97%), Gaps = 2/995 (0%)
Strand = Plus / Minus
Query: 4 agtagcgtaaaactaacctgtctcacgacggtctaaacccagctcacgttccctattagt 63
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5024 agtagggtaaaactaacctgtctcacgacggtctaaacccagctcacgttccctattagt 4965
Query: 64 gggtgaacaatccaacgcttacggaattctgcttcggtatgataggaagagcggaaatcg 123
|||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||
Sbjct: 4964 gggtgaacaatccaacgcttaccgaattctgcttcggtatgataggaagagccgacatcg 4905
Query: 124 aagaatcaaaaagaaatgtcgctatgaacgcttgaatgcracaagcaagtwatccctgtg 183
||||||||||||| ||||||||||||||||||||| ||| |||||| ||| |||||||||
Sbjct: 4904 aagaatcaaaaagcaatgtcgctatgaacgcttgactgccacaagccagttatccctgtg 4845
Query: 184 gtaacttttctggcacctctagcctcaaattccgaggacctaaaggatcgataggccaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4844 gtaacttttctggcacctctagcctcaaattccgaggacctaaaggatcgataggccaca 4785
Query: 244 ctttcatggtttgtattcacactgaaaatdaaaataaaggggacttttacccttttgttc 303
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 4784 ctttcatggtttgtattcacactgaaaatcaaaatcaaggggacttttacccttttgttc 4725
Query: 304 tactggagatttytgttctccatgagtdccccttaggacatctgcgttatcgtttaarag 363
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 4724 tactggagatttctgttctccatgagtcccccttaggacatctgcgttatcgtttaacag 4665
Query: 364 atgtgcggccccagcvaaactccccacctgacaatgtcttcaacccggatvagcccgtat 423
|||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4664 atgtgccgccccagccaaactccccacctgacaatgtcttcaacccggatcagcccgtat 4605
Query: 424 aggactttgaatgctagaacgtggaaaatgaattccagctccgcttaattgaataagtaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4604 aggactttgaatgctagaacgtggaaaatgaattccagctccgcttaattgaataagtaa 4545
Query: 484 agaaactataaaggtagtggtatttcactggcgccgaagctcccacttatgctacaccct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4544 agaaactataaaggtagtggtatttcactggcgccgaagctcccacttatgctacaccct 4485
Query: 544 ctatgtctcttcacaatgtcaaactagagtgaagctcaacagggtcttctttccccgctg 603
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4484 ctatgtctcttcacaatgtcaaactagagtcaagctcaacagggtcttctttccccgctg 4425
Query: 604 attctgckaagcccgttcccttggctgtggtttcgctagatagtagatagggacagtggg 663
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4424 attctgccaagcccgttcccttggctgtggtttcgctagatagtagatagggacagtggg 4365
Query: 664 aatctcgttaatccattcatgcgcgtcactaattagatgacgaggcatttggctacctta 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4364 aatctcgttaatccattcatgcgcgtcactaattagatgacgaggcatttggctacctta 4305
Query: 724 agagagtcatagttactcccgccgtttacccgcgcttggttgaatttcttcactttgaca 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4304 agagagtcatagttactcccgccgtttacccgcgcttggttgaatttcttcactttgaca 4245
Query: 784 ttcagagcactgggcagaaatcacattgcgtcaacatcactttctgaccatcgcaatgct 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4244 ttcagagcactgggcagaaatcacattgcgtcaacatcactttctgaccatcgcaatgct 4185
Query: 844 atgttttaattagacagtcagattccccttgttcgtaccagttctaagttgatcgttaat 903
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4184 atgttttaattagacagtcagattccccttgtccgtaccagttctaagttgatcgttaat 4125
Query: 904 tgcagcaagcgacggtctamaagagacctaccaaggccgtctacgamaaggcccgcaagc 963
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 4124 tgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaaggcccgcaagc 4065
Query: 964 agtccgt-ccaccgagcaag-ccagtaagacagtc 996
||||||| |||||||||||| ||||||||||||||
Sbjct: 4064 agtccgtcccaccgagcaagcccagtaagacagtc 4030
>3x_Contig66
Length = 1023
Score = 266 bits (133), Expect = 8e-71
Identities = 159/165 (96%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 835 cgcaatgctatgttttaattagacagtcagattccccttgttc-gtaccagttctaagtt 893
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 4 cgcaatgctatgttttaattagacagtcagattccccttggtccgtaccagttctaagtt 63
Query: 894 gatcgttaattgcagcaagcgacggtctamaagagacctaccaaggccgtctacgamaag 953
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 64 gatcgttaattgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaag 123
Query: 954 gcccgcaagcagtccgt-ccaccgagcaag-ccagtaagacagtc 996
||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 124 gcccgcaagcagtccgtcccaccgagcaagcccagtaagacagtc 168
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4349
Number of Sequences: 1807
Number of extensions: 4349
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 2
length of query: 1000
length of database: 10,358,551
effective HSP length: 16
effective length of query: 984
effective length of database: 10,329,639
effective search space: 10164364776
effective search space used: 10164364776
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)